AMTR_s00060p00157590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.94

No description available


Gene families : OG0004828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004828_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00157590

Target Alias Description ECC score Gene Family Method Actions
ATMG00580 NAD4 NADH dehydrogenase subunit 4 0.08 OrthoFinder output from all 47 species
Als_g59558 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.05 OrthoFinder output from all 47 species
Ceric.1Z123000.1 NAD4, Ceric.1Z123000 not classified & original description: pacid=50617108... 0.03 OrthoFinder output from all 47 species
Ceric.1Z196200.1 NAD4, Ceric.1Z196200 not classified & original description: pacid=50586507... 0.03 OrthoFinder output from all 47 species
Ceric.1Z237200.1 NAD4, Ceric.1Z237200 not classified & original description: pacid=50569352... 0.03 OrthoFinder output from all 47 species
Ceric.1Z247100.1 NAD4, Ceric.1Z247100 not classified & original description: pacid=50628393... 0.03 OrthoFinder output from all 47 species
Ceric.1Z258400.1 NAD4, Ceric.1Z258400 not classified & original description: pacid=50613711... 0.03 OrthoFinder output from all 47 species
Ceric.1Z287700.1 NAD4, Ceric.1Z287700 not classified & original description: pacid=50600406... 0.03 OrthoFinder output from all 47 species
Ceric.1Z293000.1 NAD4, Ceric.1Z293000 not classified & original description: pacid=50576966... 0.03 OrthoFinder output from all 47 species
Ceric.1Z303000.1 NAD4, Ceric.1Z303000 not classified & original description: pacid=50639163... 0.03 OrthoFinder output from all 47 species
Ceric.1Z308300.1 NAD4, Ceric.1Z308300 not classified & original description: pacid=50634939... 0.05 OrthoFinder output from all 47 species
Ceric.1Z312700.1 NAD4, Ceric.1Z312700 not classified & original description: pacid=50573471... 0.03 OrthoFinder output from all 47 species
Gb_07659 NAD4 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.02 OrthoFinder output from all 47 species
LOC_Os12g34094.1 NAD4, LOC_Os12g34094 NADH-ubiquinone oxidoreductase chain 4 OS=Triticum... 0.03 OrthoFinder output from all 47 species
Nbi_g17169 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.07 OrthoFinder output from all 47 species
Sam_g13523 No alias component *(ND4/NQO13) of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species
Solyc00g013180.1.1 NAD4, Solyc00g013180 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.08 OrthoFinder output from all 47 species
Solyc00g500171.1.1 NAD4, Solyc00g500171 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc00g500172.1.1 NAD4, Solyc00g500172 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.06 OrthoFinder output from all 47 species
Solyc00g500187.1.1 NAD4, Solyc00g500187 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc00g500188.1.1 NAD4, Solyc00g500188 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc00g500189.1.1 NAD4, Solyc00g500189 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.06 OrthoFinder output from all 47 species
Solyc00g500251.1.1 NAD4, Solyc00g500251 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc00g500252.1.1 NAD4, Solyc00g500252 NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc00g500253.1.1 NAD4, Solyc00g500253 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.06 OrthoFinder output from all 47 species
Solyc10g061990.3.1 NAD4, Solyc10g061990 NADH-ubiquinone oxidoreductase chain 4 OS=Brassica... 0.03 OrthoFinder output from all 47 species
Spa_g54446 NAD4 component *(ND4/NQO13) of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!