Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1, evm_27.TU.AmTr_v1.0_scaffold00060.55
Description : Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase
Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G35630 | GS2, ATGSL1, GLN2 | glutamine synthetase 2 | 0.19 | OrthoFinder output from all 47 species | |
Als_g09560 | GLN1;4 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.05 | OrthoFinder output from all 47 species | |
Aob_g04960 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g10805 | GLN1;4 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13429 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene53323.t1 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Azfi_s0008.g011642 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g08502 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.26G044000.1 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.1 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021319.42 | GLN1.3, ATGSKB6, GLN1;3 | Nutrient uptake.nitrogen assimilation.ammonium... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g05010 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.08 | OrthoFinder output from all 47 species | |
Dac_g05074 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.07 | OrthoFinder output from all 47 species | |
Dde_g08307 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.1 | OrthoFinder output from all 47 species | |
Dde_g08605 | GLN1;4 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01008483001 | ATGSR1, GLN1;1,... | Nutrient uptake.nitrogen assimilation.ammonium... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01011072001 | GS2, ATGSL1, GLN2 | Nutrient uptake.nitrogen assimilation.ammonium... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01017868001 | GS2, ATGSL1, GLN2 | Nutrient uptake.nitrogen assimilation.ammonium... | 0.07 | OrthoFinder output from all 47 species | |
Gb_12976 | GLN1;4 | Glutamine synthetase cytosolic isozyme OS=Pinus... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os04g56400.1 | GS2, ATGSL1,... | plastidial glutamine synthetase (GLN2) | 0.11 | OrthoFinder output from all 47 species | |
Len_g16696 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g12475 | GLN1;4 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
MA_9199701g0010 | ATGSR1, GLN1;1,... | Glutamine synthetase cytosolic isozyme OS=Pinus... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g24330.1 | GLN1.3, ATGSKB6, GLN1;3 | Glutamine synthetase, chloroplastic OS=Chlamydomonas... | 0.18 | OrthoFinder output from all 47 species | |
Msp_g09593 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g17432 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g08935 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g13405 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g28181 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g59187 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Pp3c20_22820V3.1 | GS2, ATGSL1,... | glutamine synthetase 2 | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g09418 | ATGSR2, GLN1;2, GSR2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g31945 | GLN1;4 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0156.g023640 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g16445 | No alias | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g19068 | No alias | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Smo270944 | ATGSR1, GLN1;1,... | Nutrient uptake.nitrogen assimilation.ammonium... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g080280.3.1 | GS2, ATGSL1,... | plastidial glutamine synthetase (GLN2) | 0.14 | OrthoFinder output from all 47 species | |
Spa_g25517 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g25518 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g39138 | ATGSR1, GLN1;1,... | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g12121 | GLN1;4 | EC_6.3 ligase forming carbon-nitrogen bond & original... | 0.1 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004356 | glutamate-ammonia ligase activity | IEA | Interproscan |
BP | GO:0006542 | glutamine biosynthetic process | IEA | Interproscan |
BP | GO:0006807 | nitrogen compound metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No external refs found! |