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  5. AMTR_s00059p00179300

AMTR_s00059p00179300 (LRD2, LACS2,...)


Aliases : LRD2, LACS2, evm_27.TU.AmTr_v1.0_scaffold00059.190

Description : Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00179300
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT4G11030 No alias AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Solyc01g099100.4.1 LACS6, ATLACS6,... peroxisomal long-chain acyl-CoA synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 78 545
No external refs found!