AMTR_s00059p00176390 (OEC33, PSBO-2, PSBO2,...)

Aliases : OEC33, PSBO-2, PSBO2, evm_27.TU.AmTr_v1.0_scaffold00059.181

Description : Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO

Gene families : OG0003452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003452_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00059p00176390
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method
AT3G50820	OEC33, PSBO-2, PSBO2	photosystem II subunit O-2	0.17	OrthoFinder output from all 47 species
AT5G66570	OEE33, PSBO1,...	PS II oxygen-evolving complex 1	0.2	OrthoFinder output from all 47 species
Adi_g047191	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.19	OrthoFinder output from all 47 species
Aev_g08346	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.15	OrthoFinder output from all 47 species
Ala_g32349	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.11	OrthoFinder output from all 47 species
Als_g07877	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.14	OrthoFinder output from all 47 species
Als_g11375	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.11	OrthoFinder output from all 47 species
Aob_g07679	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.09	OrthoFinder output from all 47 species
Aop_g08907	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.15	OrthoFinder output from all 47 species
Aspi01Gene09645.t1	OEC33, PSBO-2,...	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.05	OrthoFinder output from all 47 species
Aspi01Gene47993.t1	OEC33, PSBO-2,...	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.04	OrthoFinder output from all 47 species
Azfi_s0043.g026946	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.1	OrthoFinder output from all 47 species
Cba_g21919	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.03	OrthoFinder output from all 47 species
Cba_g78094	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.04	OrthoFinder output from all 47 species
Ceric.13G017600.1	OEC33, PSBO-2,...	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.17	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020911.42	No alias	Oxygen-evolving enhancer protein 1, chloroplastic...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020911.43	No alias	Oxygen-evolving enhancer protein 1, chloroplastic...	0.03	OrthoFinder output from all 47 species
Cre09.g396213	OEE33, PSBO1,...	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.12	OrthoFinder output from all 47 species
Dac_g07616	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.14	OrthoFinder output from all 47 species
Dac_g07617	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.11	OrthoFinder output from all 47 species
Dcu_g15120	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.12	OrthoFinder output from all 47 species
Dcu_g15121	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.15	OrthoFinder output from all 47 species
Dcu_g28902	OEE33, PSBO1,...	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.16	OrthoFinder output from all 47 species
Dde_g14744	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.18	OrthoFinder output from all 47 species
Ehy_g00922	OEE33, PSBO1,...	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.12	OrthoFinder output from all 47 species
GSVIVT01009624001	OEC33, PSBO-2, PSBO2	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.18	OrthoFinder output from all 47 species
Gb_39017	OEC33, PSBO-2, PSBO2	component PsbO/OEC33 of PS-II oxygen-evolving center	0.16	OrthoFinder output from all 47 species
LOC_Os01g31690.1	OEC33, PSBO-2,...	component PsbO/OEC33 of PS-II oxygen-evolving center	0.17	OrthoFinder output from all 47 species
Len_g09570	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.07	OrthoFinder output from all 47 species
MA_491379g0010	OEC33, PSBO-2, PSBO2	component PsbO/OEC33 of PS-II oxygen-evolving center	0.12	OrthoFinder output from all 47 species
Mp6g15300.1	OEC33, PSBO-2, PSBO2	component PsbO/OEC33 of PS-II oxygen-evolving center	0.26	OrthoFinder output from all 47 species
Msp_g11725	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.13	OrthoFinder output from all 47 species
Nbi_g14245	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.11	OrthoFinder output from all 47 species
Ore_g20774	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.06	OrthoFinder output from all 47 species
Ore_g31123	OEE33, PSBO1,...	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.11	OrthoFinder output from all 47 species
Ore_g31124	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.08	OrthoFinder output from all 47 species
Ore_g31125	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.06	OrthoFinder output from all 47 species
Pir_g09358	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.13	OrthoFinder output from all 47 species
Pnu_g33894	OEE33, PSBO1,...	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.08	OrthoFinder output from all 47 species
Pp3c4_23170V3.1	OEC33, PSBO-2,...	photosystem II subunit O-2	0.07	OrthoFinder output from all 47 species
Ppi_g34208	OEC33, PSBO-2, PSBO2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g42655	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.09	OrthoFinder output from all 47 species
Ppi_g59838	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015767	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.1	OrthoFinder output from all 47 species
Sam_g09800	No alias	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.09	OrthoFinder output from all 47 species
Smo272235	OEC33, PSBO-2, PSBO2	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.08	OrthoFinder output from all 47 species
Smo449377	OEC33, PSBO-2, PSBO2	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.12	OrthoFinder output from all 47 species
Solyc02g065400.3.1	OEC33, PSBO-2,...	component PsbO/OEC33 of PS-II oxygen-evolving center	0.19	OrthoFinder output from all 47 species
Solyc02g090030.2.1	OEC33, PSBO-2,...	component PsbO/OEC33 of PS-II oxygen-evolving center	0.21	OrthoFinder output from all 47 species
Spa_g02826	OEC33, PSBO-2, PSBO2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g06494	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.11	OrthoFinder output from all 47 species
Spa_g18854	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.15	OrthoFinder output from all 47 species
Spa_g53717	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.06	OrthoFinder output from all 47 species
Tin_g03846	OEC33, PSBO-2, PSBO2	component *(PsbO/OEC33) of PS-II oxygen-evolving center...	0.11	OrthoFinder output from all 47 species
Zm00001e013095_P001	OEE33, PSBO1,...	component PsbO/OEC33 of PS-II oxygen-evolving center	0.18	OrthoFinder output from all 47 species
Zm00001e030278_P001	OEC33, PSBO-2,...	component PsbO/OEC33 of PS-II oxygen-evolving center	0.18	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042548	regulation of photosynthesis, light reaction	None	Extended
BP	GO:0042549	photosystem II stabilization	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004047	aminomethyltransferase activity	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0009063	amino acid catabolic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009071	serine family amino acid catabolic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0042132	fructose 1,6-bisphosphate 1-phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
MF	GO:0048037	obsolete cofactor binding	IEP	HCCA
MF	GO:0050308	sugar-phosphatase activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901606	alpha-amino acid catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002628	PSII_MSP	95	331

External Links

No external refs found!

AMTR_s00059p00176390 (OEC33, PSBO-2, PSBO2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation