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  5. AMTR_s00059p00116150

AMTR_s00059p00116150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.90

Description : RNA biosynthesis.transcriptional activation.PLATZ transcription factor


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00116150
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Adi_g056182 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074284 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03897 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12654 No alias PLATZ-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g47406 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04112 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21595.t1 Aspi01Gene21595 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47095.t2 Aspi01Gene47095 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49362.t1 Aspi01Gene49362 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g52925 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G040100.1 Ceric.13G040100 PLATZ-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.23G020700.1 Ceric.23G020700 PLATZ-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g31293 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g50120.1 LOC_Os04g50120 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Lfl_g01216 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g07250.1 No alias transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Ore_g08208 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20268 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27586 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025441 No alias not classified & original description: CDS=1-1005 0.03 OrthoFinder output from all 47 species
Sam_g26003 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Solyc08g076860.3.1 Solyc08g076860 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Spa_g53768 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002426_P001 Zm00001e002426 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 62 133
No external refs found!