Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.89
No description available
Gene families : OG0009133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009133_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00059p00114020 | |
Cluster | HCCA: Cluster_97 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G75150 | No alias | unknown protein; Has 38228 Blast hits to 24529 proteins... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g26641 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g03190 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene61629.t1 | Aspi01Gene61629 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
Ceric.32G007200.1 | Ceric.32G007200 | not classified & original description: pacid=50597738... | 0.12 | OrthoFinder output from all 47 species | |
Dac_g31278 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g13673 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
GSVIVT01009687001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Len_g57892 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
Lfl_g25659 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
MA_10285g0010 | No alias | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
Mp5g13410.1 | No alias | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
Nbi_g01318 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g40913 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0072.g016943 | No alias | not classified & original description: CDS=1-2439 | 0.07 | OrthoFinder output from all 47 species | |
Smo414278 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
Solyc07g025380.3.1 | Solyc07g025380 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Tin_g10605 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e006116_P001 | Zm00001e006116 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | HCCA |
BP | GO:0000725 | recombinational repair | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006302 | double-strand break repair | IEP | HCCA |
BP | GO:0006304 | DNA modification | IEP | HCCA |
BP | GO:0006305 | DNA alkylation | IEP | HCCA |
BP | GO:0006306 | DNA methylation | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
BP | GO:0007090 | obsolete regulation of S phase of mitotic cell cycle | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044728 | DNA methylation or demethylation | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |