1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00059p00093680

AMTR_s00059p00093680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00059.67

Description : Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT beta-1,2-arabinosyltransferase


Gene families : OG0003060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003060_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00093680

Target Alias Description ECC score Gene Family Method Actions
Adi_g006514 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Adi_g108829 No alias beta-1,2-arabinosyltransferase *(RRA) & original... 0.02 OrthoFinder output from all 47 species
Aop_g05966 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72321.t1 RRA2, Aspi01Gene72321 beta-1,2-arabinosyltransferase *(RRA) & original... 0.03 OrthoFinder output from all 47 species
Ore_g17038 RRA2 beta-1,2-arabinosyltransferase *(RRA) & original... 0.03 OrthoFinder output from all 47 species
Sam_g11390 No alias beta-1,2-arabinosyltransferase *(RRA) & original... 0.04 OrthoFinder output from all 47 species
Smo103279 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008242 omega peptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 185 406
No external refs found!