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  5. AMTR_s00059p00072050

AMTR_s00059p00072050 (AtRABG3d, RABG3d,...)


Aliases : AtRABG3d, RABG3d, evm_27.TU.AmTr_v1.0_scaffold00059.46

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.G-class RAB GTPase


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00059p00072050

Target Alias Description ECC score Gene Family Method Actions
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.06 OrthoFinder output from all 47 species
Adi_g115862 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011066 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=116-736 0.03 OrthoFinder output from all 47 species
Dac_g04092 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49977 ATRABG3B,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os01g12730.1 AtRABG3d,... G-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os01g51700.1 ATRABG3B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Len_g17913 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06063 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g40856 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011168 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=38-799 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021652 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=113-889 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0287.g027148 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=209-802 0.01 OrthoFinder output from all 47 species
Sam_g07442 No alias G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g109520.3.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g12567 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0007264 small GTPase mediated signal transduction IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 132
No external refs found!