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  5. AMTR_s00058p00181770

AMTR_s00058p00181770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.172

Description : Protein EXECUTER 2, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0002774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002774_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00181770
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Adi_g010910 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.02 OrthoFinder output from all 47 species
Adi_g056589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056591 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.06 OrthoFinder output from all 47 species
Ala_g10825 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.03 OrthoFinder output from all 47 species
Aob_g16296 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.04 OrthoFinder output from all 47 species
Aop_g10602 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35610.t1 Aspi01Gene35610 plastidial regulatory protein *(EXECUTER) of singlet... 0.02 OrthoFinder output from all 47 species
Cba_g15391 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.02 OrthoFinder output from all 47 species
Ceric.30G051700.1 EX1, Ceric.30G051700 plastidial regulatory protein *(EXECUTER) of singlet... 0.02 OrthoFinder output from all 47 species
Dcu_g30311 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.03 OrthoFinder output from all 47 species
Ehy_g07075 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.03 OrthoFinder output from all 47 species
GSVIVT01007764001 No alias Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_35088 No alias Protein EXECUTER 2, chloroplastic OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Len_g15449 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.02 OrthoFinder output from all 47 species
Lfl_g15638 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.03 OrthoFinder output from all 47 species
MA_10431343g0010 No alias Protein EXECUTER 2, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g02095 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.02 OrthoFinder output from all 47 species
Nbi_g04418 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.04 OrthoFinder output from all 47 species
Ore_g15371 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.03 OrthoFinder output from all 47 species
Sam_g51885 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.06 OrthoFinder output from all 47 species
Smo166436 EX1 Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo175826 No alias Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g105990.3.1 EX1, Solyc01g105990 Protein EXECUTER 1, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g22097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46885 No alias plastidial regulatory protein *(EXECUTER) of singlet... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!