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  5. AMTR_s00058p00159400

AMTR_s00058p00159400 (APAO, ATPAO1, PAO1,...)


Aliases : APAO, ATPAO1, PAO1, evm_27.TU.AmTr_v1.0_scaffold00058.138

Description : Polyamine metabolism.spermidine/spermine.degradation.polyamine oxidase


Gene families : OG0001779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00159400
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Adi_g009450 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
Als_g61529 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.02 OrthoFinder output from all 47 species
Aop_g00216 APAO, ATPAO1, PAO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57106.t1 APAO, ATPAO1,... EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
Dac_g09516 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.03 OrthoFinder output from all 47 species
Msp_g03560 APAO, ATPAO1, PAO1 EC_1.5 oxidoreductase acting on CH-NH group of donor &... 0.02 OrthoFinder output from all 47 species
Smo439136 APAO, ATPAO1, PAO1 Polyamine... 0.03 OrthoFinder output from all 47 species
Zm00001e000806_P001 APAO, ATPAO1,... cytosolic polyamine oxidase (PAO1) 0.02 OrthoFinder output from all 47 species
Zm00001e000808_P001 APAO, ATPAO1,... cytosolic polyamine oxidase (PAO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 240 468
IPR002937 Amino_oxidase 35 121
No external refs found!