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  5. AMTR_s00058p00158800

AMTR_s00058p00158800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00058.137

No description available


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00158800

Target Alias Description ECC score Gene Family Method Actions
AT1G52245 No alias No description available 0.05 OrthoFinder output from all 47 species
Adi_g031119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014353001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_19478 No alias Dynein 8 kDa light chain, flagellar outer arm... 0.02 OrthoFinder output from all 47 species
LOC_Os01g55510.1 LOC_Os01g55510 Dynein 8 kDa light chain, flagellar outer arm... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018319 No alias not classified & original description: CDS=791-1699 0.02 OrthoFinder output from all 47 species
Tin_g34772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022826_P001 Zm00001e022826 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEA Interproscan
BP GO:0007017 microtubule-based process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 12 99
No external refs found!