AMTR_s00058p00150890 (PDE225, PTAC7,...)


Aliases : PDE225, PTAC7, evm_27.TU.AmTr_v1.0_scaffold00058.119

Description : RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC7 component


Gene families : OG0006155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006155_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00150890

Target Alias Description ECC score Gene Family Method Actions
Aev_g24666 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.02 OrthoFinder output from all 47 species
Ala_g00524 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.1 OrthoFinder output from all 47 species
Als_g11529 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.02 OrthoFinder output from all 47 species
Aob_g10648 PDE225, PTAC7 cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene57210.t1 Aspi01Gene57210 cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.01 OrthoFinder output from all 47 species
Azfi_s0048.g030444 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.01 OrthoFinder output from all 47 species
Ceric.16G052300.1 Ceric.16G052300 cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.02 OrthoFinder output from all 47 species
Ceric.38G050000.1 Ceric.38G050000 cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.04 OrthoFinder output from all 47 species
Dcu_g13646 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.04 OrthoFinder output from all 47 species
Dde_g22531 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.01 OrthoFinder output from all 47 species
LOC_Os01g50930.1 PDE225, PTAC7,... TAC7 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Len_g05638 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.04 OrthoFinder output from all 47 species
Nbi_g30385 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.04 OrthoFinder output from all 47 species
Pir_g00281 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.02 OrthoFinder output from all 47 species
Sam_g46780 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.02 OrthoFinder output from all 47 species
Smo437596 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Tin_g35005 No alias cofactor of plastid-encoded RNA polymerase *(PAP12/TAC7)... 0.05 OrthoFinder output from all 47 species
Zm00001e028140_P001 PDE225, PTAC7,... TAC7 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!