AMTR_s00058p00048170 (TRP6, PAI1,...)

Aliases : TRP6, PAI1, evm_27.TU.AmTr_v1.0_scaffold00058.19

Description : Amino acid metabolism.biosynthesis.shikimate family.tryptophan.phosphoribosyanthranilate isomerase

Gene families : OG0004856 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004856_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00058p00048170

Target	Alias	Description	ECC score	Gene Family Method
AT1G07780	TRP6, PAI1	phosphoribosylanthranilate isomerase 1	0.04	OrthoFinder output from all 47 species
Ala_g09732	TRP6, PAI1	phosphoribosyanthranilate isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g34757	TRP6, PAI1	phosphoribosyanthranilate isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g25620	TRP6, PAI1	phosphoribosyanthranilate isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g03813	TRP6, PAI1	phosphoribosyanthranilate isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020311	TRP6, PAI1	phosphoribosyanthranilate isomerase & original...	0.02	OrthoFinder output from all 47 species
Sam_g52741	No alias	phosphoribosyanthranilate isomerase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004640	phosphoribosylanthranilate isomerase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006568	tryptophan metabolic process	IEA	Interproscan
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006586	indolalkylamine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009072	aromatic amino acid metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016860	intramolecular oxidoreductase activity	None	Extended
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042430	indole-containing compound metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001240	PRAI_dom	53	254

External Links

No external refs found!

AMTR_s00058p00048170 (TRP6, PAI1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation