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  5. AMTR_s00058p00045920

AMTR_s00058p00045920 (LPA2,...)


Aliases : LPA2, evm_27.TU.AmTr_v1.0_scaffold00058.17

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein


Gene families : OG0007940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007940_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00058p00045920
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cre02.g105650 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Lfl_g12461 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.03 OrthoFinder output from all 47 species
Tin_g32900 LPA2 protein involved in PS-II assembly *(LPA2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004047 aminomethyltransferase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!