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  5. AMTR_s00057p00158850

AMTR_s00057p00158850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.147

No description available


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00158850

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00135930 evm_27.TU.AmTr_v1... Casparian strip membrane protein 2 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.04 OrthoFinder output from all 47 species
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
Gb_11697 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
Gb_26811 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g26120.1 LOC_Os01g26120 CASP-like protein 1E1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os04g38690.1 LOC_Os04g38690 Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58760.1 LOC_Os04g58760 Casparian strip membrane protein 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os06g12500.1 LOC_Os06g12500 Casparian strip membrane protein 3 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os08g01160.1 LOC_Os08g01160 Casparian strip membrane protein 2 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Lfl_g29809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_1041g0010 No alias Casparian strip membrane protein 2 OS=Triphysaria... 0.04 OrthoFinder output from all 47 species
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.03 OrthoFinder output from all 47 species
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
Solyc02g067190.4.1 Solyc02g067190 Casparian strip membrane protein 1 OS=Solanum tuberosum... 0.08 OrthoFinder output from all 47 species
Solyc04g005620.3.1 Solyc04g005620 Casparian strip membrane protein 2 OS=Solanum demissum... 0.03 OrthoFinder output from all 47 species
Solyc06g074230.3.1 Solyc06g074230 Casparian strip membrane protein 2 OS=Triphysaria... 0.03 OrthoFinder output from all 47 species
Solyc09g010200.4.1 Solyc09g010200 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc10g083250.2.1 Solyc10g083250 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Zm00001e036094_P001 Zm00001e036094 Casparian strip membrane protein 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 30 86
No external refs found!