AMTR_s00057p00122610 (SCC3, ATSCC3,...)


Aliases : SCC3, ATSCC3, evm_27.TU.AmTr_v1.0_scaffold00057.101

Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component


Gene families : OG0004065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004065_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00122610

Target Alias Description ECC score Gene Family Method Actions
AT2G47980 SCC3, ATSCC3 sister-chromatid cohesion protein 3 0.02 OrthoFinder output from all 47 species
Adi_g059337 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Ceric.18G084600.1 SCC3, ATSCC3,... component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000189.50 SCC3, ATSCC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
GSVIVT01011020001 SCC3, ATSCC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
LOC_Os05g09620.1 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Len_g23184 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g34617 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
MA_10426289g0010 SCC3, ATSCC3 Sister-chromatid cohesion protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10426289g0020 SCC3, ATSCC3 component SCC3 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Msp_g14889 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Ore_g15148 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Pir_g10942 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015994 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Sam_g50912 No alias component *(SCC3) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e011344_P004 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013721 STAG 185 289
No external refs found!