AMTR_s00057p00084630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.56

No description available


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00084630

Target Alias Description ECC score Gene Family Method Actions
AT2G19460 No alias Protein of unknown function (DUF3511) 0.03 OrthoFinder output from all 47 species
AT3G05725 No alias Protein of unknown function (DUF3511) 0.1 OrthoFinder output from all 47 species
AT3G62640 No alias Protein of unknown function (DUF3511) 0.07 OrthoFinder output from all 47 species
Adi_g050499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0193.g057123 No alias not classified & original description: CDS=1-753 0.03 OrthoFinder output from all 47 species
Ceric.01G005200.1 Ceric.01G005200 not classified & original description: pacid=50593030... 0.03 OrthoFinder output from all 47 species
Ceric.21G051200.1 Ceric.21G051200 not classified & original description: pacid=50602840... 0.02 OrthoFinder output from all 47 species
Ehy_g07334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035043001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os01g20000.1 LOC_Os01g20000 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g38660.1 LOC_Os01g38660 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g61590.1 LOC_Os03g61590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28840.1 LOC_Os05g28840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g36810.1 LOC_Os06g36810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g17454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_17476g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g37590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017498_P001 Zm00001e017498 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR021899 DUF3511 56 102
No external refs found!