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  5. AMTR_s00057p00067120

AMTR_s00057p00067120 (AMSH1,...)


Aliases : AMSH1, evm_27.TU.AmTr_v1.0_scaffold00057.41

Description : Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.AMSH3 deubiquitinase


Gene families : OG0001591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00067120

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene16647.t1 AMSH1, Aspi01Gene16647 deubiquitinase *(AMSH) & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000455.54 AMSH1 No description available 0.01 OrthoFinder output from all 47 species
Dcu_g08515 AMSH2 deubiquitinase *(AMSH) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g03972 AMSH1 deubiquitinase *(AMSH) & original description: none 0.03 OrthoFinder output from all 47 species
Smo82317 AMSH2 Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000555 JAMM/MPN+_dom 345 450
No external refs found!