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  5. AMTR_s00057p00026390

AMTR_s00057p00026390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00057.10

Description : Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii


Gene families : OG0001886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001886_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00057p00026390
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.02 OrthoFinder output from all 47 species
Adi_g074760 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g13611 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g18824 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g48705 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
GSVIVT01035014001 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Gb_35200 No alias Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Lfl_g11003 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
MA_58934g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g16205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29281 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g40587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g060040.3.1 Solyc01g060040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g079510.3.1 Solyc01g079510 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 382 422
IPR001680 WD40_repeat 300 335
IPR001680 WD40_repeat 508 566
IPR001680 WD40_repeat 643 681
IPR001680 WD40_repeat 459 490
IPR001680 WD40_repeat 341 376
IPR001487 Bromodomain 1771 1825
No external refs found!