AMTR_s00056p00226270 (MRP6, ATMRP6, ABCC8,...)


Aliases : MRP6, ATMRP6, ABCC8, evm_27.TU.AmTr_v1.0_scaffold00056.229

Description : ABC transporter C family member 8 OS=Arabidopsis thaliana


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00226270

Target Alias Description ECC score Gene Family Method Actions
AT3G60160 MRP9, ABCC9, ATMRP9 multidrug resistance-associated protein 9 0.05 OrthoFinder output from all 47 species
AT3G60970 MRP15, ABCC15, ATMRP15 multidrug resistance-associated protein 15 0.05 OrthoFinder output from all 47 species
Adi_g005383 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g121407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11720 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14941 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15090 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21167 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02697 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06133 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20128 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44914 AtABCC2, ABCC2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59785 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18327 ABCC7, ATMRP7, MRP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20294 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09685.t1 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19905.t1 MRP6, ATMRP6,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22437.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64199.t1 MRP10, ATMRP10,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07486 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14096 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38812 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G016300.1 ATABCC5, MRP5,... subfamily ABCC transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.23G061900.1 ABCC1, ATABCC1,... subfamily ABCC transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05478 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12577 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18227 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23847 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44465 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44715 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46040 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26331 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24738 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010326001 ABCC3, ATMRP3, MRP3 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01019476001 ATMRP14, ABCC10, MRP14 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_14725 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Gb_39319 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g07870.1 ABCC3, ATMRP3,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
LOC_Os01g25386.1 EST3, MRP4,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
LOC_Os06g06440.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
LOC_Os11g05700.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Lfl_g12997 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18327 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431617g0010 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
MA_10436190g0030 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10436190g0040 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_11781g0010 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
MA_11781g0020 MRP6, ATMRP6, ABCC8 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_380601g0010 MRP6, ATMRP6, ABCC8 ABC transporter C family member 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8849g0010 ABCC3, ATMRP3, MRP3 subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Mp7g13860.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Pir_g15325 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29525 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32692 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43714 ABCC12, MRP13, ATMRP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12952 ATMRP14, ABCC10, MRP14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17304 ATMRP14, ABCC10, MRP14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-2715 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004014 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=118-4101 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014950 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=1-4785 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=1-4845 0.02 OrthoFinder output from all 47 species
Smo107555 MRP15, ABCC15, ATMRP15 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo402326 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc06g011620.1.1 MRP10, ATMRP10,... ABC transporter C family member 14 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g065320.4.1 ABCC3, ATMRP3,... subfamily ABCC transporter 0.05 OrthoFinder output from all 47 species
Solyc08g081890.4.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Solyc12g044810.3.1 MRP6, ATMRP6,... ABC transporter C family member 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g25224 ABCC12, MRP13, ATMRP13 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!