AMTR_s00056p00218850

Description : External stimuli response.biotic stress.pathogen effector.NLR effector receptor

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00056p00218850

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00138210	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.04	OrthoFinder output from all 47 species
AT1G27180	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	OrthoFinder output from all 47 species
AT1G69550	No alias	disease resistance protein (TIR-NBS-LRR class)	0.03	OrthoFinder output from all 47 species
AT3G44480	cog1, RPP1	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT3G44670	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT4G16860	RPP4	Disease resistance protein (TIR-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT4G16890	SNC1, BAL	disease resistance protein (TIR-NBS-LRR class), putative	0.03	OrthoFinder output from all 47 species
AT5G38340	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT5G40060	No alias	Disease resistance protein (NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
Ala_g19727	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g50407	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_662972g0010	No alias	effector receptor (NLR)	0.03	OrthoFinder output from all 47 species
Nbi_g23825	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c10_20790V3.1	Pp3c10_20790	disease resistance protein (TIR-NBS-LRR class)	0.01	OrthoFinder output from all 47 species
Solyc05g007850.2.1	Solyc05g007850	effector receptor (NLR)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	60	242

External Links

No external refs found!

AMTR_s00056p00218850

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation