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  5. AMTR_s00056p00168250

AMTR_s00056p00168250 (IQD26,...)


Aliases : IQD26, evm_27.TU.AmTr_v1.0_scaffold00056.148

No description available


Gene families : OG0012522 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012522_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00168250
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT3G16490 IQD26 IQ-domain 26 0.03 OrthoFinder output from all 47 species
LOC_Os01g17300.1 LOC_Os01g17300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64290.1 IQD26, LOC_Os01g64290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 131 151
IPR000048 IQ_motif_EF-hand-BS 157 171
IPR025064 DUF4005 358 434
No external refs found!