AMTR_s00056p00160320 (PFN3, PRF3,...)

Aliases : PFN3, PRF3, evm_27.TU.AmTr_v1.0_scaffold00056.137

Description : Cytoskeleton.microfilament network.actin polymerisation.profilin actin nucleation protein

Gene families : OG0000183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00056p00160320

Target	Alias	Description	ECC score	Gene Family Method
Adi_g101735	No alias	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01728	PFN3, PRF3	profilin actin nucleation protein & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g33142	PFN1, PRF1	profilin actin nucleation protein & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g13135	No alias	profilin actin nucleation protein & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g14096	PRO2, PFN2, PRF2	profilin actin nucleation protein & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g31946	PFN1, PRF1	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.06G066200.1	PFN1, PRF1,...	profilin actin nucleation protein & original...	0.06	OrthoFinder output from all 47 species
Cre10.g427250	No alias	Cytoskeleton.microfilament network.actin...	0.03	OrthoFinder output from all 47 species
Dcu_g29148	No alias	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g41790	PRO2, PFN2, PRF2	profilin actin nucleation protein & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os06g05880.1	PRF5, LOC_Os06g05880	profilin actin nucleation protein	0.03	OrthoFinder output from all 47 species
Len_g16600	PFN1, PRF1	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g08402	PFN3, PRF3	profilin actin nucleation protein & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g24655	PFN3, PRF3	profilin actin nucleation protein & original description: none	0.03	OrthoFinder output from all 47 species
Mp6g13930.1	PRF5	profilin actin nucleation protein	0.03	OrthoFinder output from all 47 species
Mp8g06710.1	PFN1, PRF1	profilin actin nucleation protein	0.04	OrthoFinder output from all 47 species
Msp_g38364	PRF5	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g31761	PRO2, PFN2, PRF2	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c18_15960V3.1	PRO2, PFN2,...	profilin 2	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000422	PFN3, PRF3	profilin actin nucleation protein & original...	0.03	OrthoFinder output from all 47 species
Sam_g43769	No alias	profilin actin nucleation protein & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g23508	PRF5	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g50667	PRF5	profilin actin nucleation protein & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e036481_P001	PRF5, Zm00001e036481	profilin actin nucleation protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030036	actin cytoskeleton organization	IEA	Interproscan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005455	PFN	2	126

External Links

No external refs found!

AMTR_s00056p00160320 (PFN3, PRF3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation