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  5. AMTR_s00056p00154810

AMTR_s00056p00154810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.130

No description available


Gene families : OG0000658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00154810

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0078.g038101 No alias not classified & original description: CDS=1-975 0.01 OrthoFinder output from all 47 species
Ceric.28G043600.1 Ceric.28G043600 not classified & original description: pacid=50570091... 0.03 OrthoFinder output from all 47 species
Ehy_g00818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023830001 No alias No description available 0.04 OrthoFinder output from all 47 species
Lfl_g07702 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_8342g0010 ATOXS3, OXS3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g068970.3.1 Solyc08g068970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g25254 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!