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  5. AMTR_s00056p00072660

AMTR_s00056p00072660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.50

Description : CASP-like protein 3A1 OS=Vitis vinifera


Gene families : OG0008237 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00072660
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Ehy_g05314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g120870.3.1 Solyc03g120870 CASP-like protein 3A1 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 1 49
No external refs found!