AMTR_s00056p00069820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.47

Description : Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00069820
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Adi_g059907 No alias xylogalacturonan xylosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19945.t1 Aspi01Gene19945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28831.t1 Aspi01Gene28831 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015330001 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Msp_g11062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo230410 No alias Cell... 0.03 OrthoFinder output from all 47 species
Solyc06g064490.2.1 Solyc06g064490 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g066690.4.1 Solyc08g066690 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR004263 Exostosin 321 431
No external refs found!