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  5. AMTR_s00055p00220020

AMTR_s00055p00220020 (PBF1,...)


Aliases : PBF1, evm_27.TU.AmTr_v1.0_scaffold00055.168

Description : Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component


Gene families : OG0004409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00220020

Target Alias Description ECC score Gene Family Method Actions
Adi_g015227 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ceric.24G072400.1 PBF1, Ceric.24G072400 beta-type-6 component *(PBF) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Cre26.g756797 PBF1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
GSVIVT01027613001 PBF1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
LOC_Os09g32800.1 PBF1, LOC_Os09g32800 component beta type-6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp1g12450.1 PBF1 component beta type-6 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Msp_g43692 PBF1 beta-type-6 component *(PBF) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pp3c16_16960V3.1 PBF1, Pp3c16_16960 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 19 214
No external refs found!