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  5. AMTR_s00055p00209070

AMTR_s00055p00209070 (GT-1,...)


Aliases : GT-1, evm_27.TU.AmTr_v1.0_scaffold00055.148

Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0003320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00209070

Target Alias Description ECC score Gene Family Method Actions
Pir_g15532 GT-1 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24332 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06091 GT-1 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!