AMTR_s00055p00174750 (GPDL2, SHV3, MRH5,...)

Aliases : GPDL2, SHV3, MRH5, evm_27.TU.AmTr_v1.0_scaffold00055.91

Description : Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana

Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00055p00174750

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00252p00015420	SVL4,...	Glycerophosphodiester phosphodiesterase GDPDL6...	0.04	OrthoFinder output from all 47 species
AT1G66970	SVL2	SHV3-like 2	0.04	OrthoFinder output from all 47 species
AT1G66980	SNC4	suppressor of npr1-1 constitutive 4	0.05	OrthoFinder output from all 47 species
AT4G26690	GPDL2, SHV3, MRH5	PLC-like phosphodiesterase family protein	0.06	OrthoFinder output from all 47 species
AT5G55480	SVL1	SHV3-like 1	0.03	OrthoFinder output from all 47 species
AT5G58050	SVL4	SHV3-like 4	0.03	OrthoFinder output from all 47 species
AT5G58170	SVL5	SHV3-like 5	0.03	OrthoFinder output from all 47 species
Adi_g059201	SVL5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g15087	GPDL2, SHV3, MRH5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08832	SVL4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene71896.t1	SVL5, Aspi01Gene71896	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07994	SVL4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Gb_10598	SVL1	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	OrthoFinder output from all 47 species
Gb_18319	SVL1	Glycerophosphodiester phosphodiesterase GDPDL4...	0.03	OrthoFinder output from all 47 species
LOC_Os02g09450.1	SVL5, LOC_Os02g09450	Glycerophosphodiester phosphodiesterase GDPDL7...	0.03	OrthoFinder output from all 47 species
LOC_Os04g39610.1	GPDL2, SHV3,...	Glycerophosphodiester phosphodiesterase GDPDL4...	0.03	OrthoFinder output from all 47 species
Len_g08984	SVL5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02261	SVL4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp8g07940.1	SVL5	Glycerophosphodiester phosphodiesterase GDPDL7...	0.03	OrthoFinder output from all 47 species
Msp_g26126	SVL5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g26745	SVL5	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g05893	SVL5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021443	SVL5	not classified & original description: CDS=22-1383	0.02	OrthoFinder output from all 47 species
Solyc02g014530.4.1	SVL4, Solyc02g014530	Glycerophosphodiester phosphodiesterase GDPDL6...	0.03	OrthoFinder output from all 47 species
Solyc07g065120.3.1	SVL1, Solyc07g065120	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	OrthoFinder output from all 47 species
Zm00001e003501_P003	SVL1, Zm00001e003501	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	OrthoFinder output from all 47 species
Zm00001e024367_P002	SVL1, Zm00001e024367	Glycerophosphodiester phosphodiesterase GDPDL4...	0.03	OrthoFinder output from all 47 species
Zm00001e025069_P001	SVL5, Zm00001e025069	Glycerophosphodiester phosphodiesterase GDPDL7...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006071	glycerol metabolic process	IEA	Interproscan
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019400	alditol metabolic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AMTR_s00055p00174750 (GPDL2, SHV3, MRH5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation