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  5. AMTR_s00055p00140570

AMTR_s00055p00140570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00055.62

No description available


Gene families : OG0001915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00055p00140570

Target Alias Description ECC score Gene Family Method Actions
Als_g05056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54480.t1 Aspi01Gene54480 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g39620.2 LOC_Os07g39620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_19856g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g11381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g065220.3.1 Solyc07g065220 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035392_P001 Zm00001e035392 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 11 95
No external refs found!