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  5. AMTR_s00053p00115370

AMTR_s00053p00115370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00053.65

Description : RNA biosynthesis.transcriptional activation.bZIP superfamily.TGA transcription factor activity.BOP transcriptional co-activator


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00115370

Target Alias Description ECC score Gene Family Method Actions
AT3G57130 BOP1 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.02 OrthoFinder output from all 47 species
Als_g04873 BOP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.15G028200.1 BOP2, Ceric.15G028200 not classified & original description: pacid=50640925... 0.06 OrthoFinder output from all 47 species
Dac_g08352 ATNPR3, NPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033571001 BOP2 RNA biosynthesis.transcriptional activation.bZIP... 0.04 OrthoFinder output from all 47 species
LOC_Os11g04600.1 BOP2, LOC_Os11g04600 transcriptional co-activator (BOP) 0.08 OrthoFinder output from all 47 species
LOC_Os12g04410.1 BOP2, LOC_Os12g04410 transcriptional co-activator (BOP) 0.07 OrthoFinder output from all 47 species
Nbi_g03720 BOP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10052 BOP1 transcriptional co-activator *(BOP) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g079750.2.1 BOP2, Solyc10g079750 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species
Tin_g12666 BOP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009187_P001 BOP2, Zm00001e009187 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species
Zm00001e016561_P001 NPR1, SAI1,... salicylic acid receptor protein (NPR1). NPR1 systemic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR024228 NPR_central_dom 202 245
IPR020683 DUF3447 248 334
No external refs found!