AMTR_s00052p00143130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00052.47

No description available


Gene families : OG0008018 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00052p00143130
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Aop_g38480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c10_2350V3.1 Pp3c10_2350 No annotation 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008937 ferredoxin-NAD(P) reductase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!