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  5. AMTR_s00052p00100800

AMTR_s00052p00100800 (DXPS3,...)


Aliases : DXPS3, evm_27.TU.AmTr_v1.0_scaffold00052.29

Description : Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase


Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00052p00100800

Target Alias Description ECC score Gene Family Method Actions
Als_g38673 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Aop_g05181 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Len_g05408 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Len_g30796 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014635 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 359 518
IPR005477 Dxylulose-5-P_synthase 33 317
No external refs found!