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  5. AMTR_s00051p00191940

AMTR_s00051p00191940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00051.78

Description : Protein IRREGULAR XYLEM 15 OS=Arabidopsis thaliana


Gene families : OG0001631 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00051p00191940
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT1G09610 No alias Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
AT3G50220 No alias Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
AT5G67210 No alias Protein of unknown function (DUF579) 0.02 OrthoFinder output from all 47 species
Aspi01Gene65837.t1 Aspi01Gene65837 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65838.t1 Aspi01Gene65838 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.03 OrthoFinder output from all 47 species
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g10320.1 LOC_Os12g10320 glucuronoxylan 4-O-methyltransferase 0.03 OrthoFinder output from all 47 species
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.02 OrthoFinder output from all 47 species
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g031950.1.1 Solyc11g031950 glucuronoxylan 4-O-methyltransferase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 95 274
No external refs found!