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  5. AMTR_s00050p00180490

AMTR_s00050p00180490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00050.40

Description : Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana


Gene families : OG0001589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00050p00180490

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene53637.t1 ACBP4, Aspi01Gene53637 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08239 ACBP4 acyl-CoA-binding protein *(ACBP4/5) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016168001 No alias Acyl-CoA-binding domain-containing protein 4... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57690.2 LOC_Os02g57690 Acyl-CoA-binding domain-containing protein 6 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Mp3g16170.1 ACBP4 Acyl-CoA-binding domain-containing protein 4... 0.02 OrthoFinder output from all 47 species
Ore_g09453 ACBP4 acyl-CoA-binding protein *(ACBP4/5) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 37 79
No external refs found!