Zm00001d023431 (GRMZM2G113093)


Aliases : GRMZM2G113093

Description : 29.3.3 protein.targeting.chloroplast mutant has Yellow first leaves Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit (CPSRP54)


Gene families : OG_01_0005541 (Gene family) Phylogenetic Tree(s): OG0005541_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d023431
Cluster HCCA cluster: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT5G03940 54CP, SRP54CP,... chloroplast signal recognition particle 54 kDa subunit 0.13 Gene family
Cre11.g479750 No alias 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.06 Gene family
GSVIVT01033862001 No alias 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.07 Gene family
LOC_Os11g05552 Os11g0153600 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.1 Gene family
LOC_Os11g05556 Os11g0153700 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.13 Gene family
MA_10274946g0010 No alias 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.02 Gene family
Solyc09g009940.3.1 Solyc09g009940.3 29.3.3 protein.targeting.chloroplast mutant has Yellow... 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000897 SRP54_GTPase_dom 174 369
IPR004125 Signal_recog_particle_SRP54_M 400 500
IPR013822 Signal_recog_particl_SRP54_hlx 79 156
No external refs found!