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  5. AMTR_s00049p00218010

AMTR_s00049p00218010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.253

Description : Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00218010

Target Alias Description ECC score Gene Family Method Actions
Cba_g04012 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12917 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032387001 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
LOC_Os05g05300.1 LOC_Os05g05300 Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
Len_g19656 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g36657 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427237g0020 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.05 OrthoFinder output from all 47 species
Ore_g32275 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19431 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66193 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08828 No alias splicing factor *(CFM9) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49602 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10764 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027517_P001 Zm00001e027517 Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
Zm00001e040411_P001 Zm00001e040411 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 168 252
No external refs found!