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  5. AMTR_s00049p00208380

AMTR_s00049p00208380 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.229

Description : C2 and GRAM domain-containing protein At1g03370 OS=Arabidopsis thaliana


Gene families : OG0002452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00208380
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AT1G03370 No alias C2 calcium/lipid-binding and GRAM domain containing protein 0.04 OrthoFinder output from all 47 species
Ala_g13453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16267 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g10630.1 LOC_Os02g10630 C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
LOC_Os04g40070.1 LOC_Os04g40070 C2 and GRAM domain-containing protein At5g50170... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40570.1 LOC_Os06g40570 C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
LOC_Os08g38440.1 LOC_Os08g38440 C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species
Len_g08450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo118690 No alias C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species
Zm00001e036865_P001 Zm00001e036865 C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 692 754
IPR000008 C2_dom 539 619
IPR000008 C2_dom 3 82
No external refs found!