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  5. AMTR_s00004p00165390

AMTR_s00004p00165390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00004.182

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.YABBY transcription factor


Gene families : OG_01_0000890 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000890_tree ,
OG_02_0002078 (LandPlants) Phylogenetic Tree(s): OG_02_0002078_tree ,
OG_03_0001123 (SeedPlants) Phylogenetic Tree(s): OG_03_0001123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00004p00165390
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01013778001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Gb_22423 No alias transcription factor (YABBY) 0.02 Archaeplastida
LOC_Os03g11600.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.07 Archaeplastida
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.12 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.03 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.01 LandPlants
GSVIVT01037533001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.02 LandPlants
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006780 YABBY 2 156
No external refs found!