AMTR_s00049p00198890 (emb1745,...)

Aliases : emb1745, evm_27.TU.AmTr_v1.0_scaffold00049.211

Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.GLE1 scaffold nucleoporin

Gene families : OG0004887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004887_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00049p00198890

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene69892.t1	Aspi01Gene69892	regulatory protein *(GLE1) of LOS4 helicase & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0371.g067123	emb1745	regulatory protein *(GLE1) of LOS4 helicase & original...	0.02	OrthoFinder output from all 47 species
Lfl_g33862	No alias	regulatory protein *(GLE1) of LOS4 helicase & original...	0.03	OrthoFinder output from all 47 species
Msp_g05343	emb1745	regulatory protein *(GLE1) of LOS4 helicase & original...	0.03	OrthoFinder output from all 47 species
Pnu_g20046	emb1745	regulatory protein *(GLE1) of LOS4 helicase & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
BP	GO:0006405	RNA export from nucleus	None	Extended
BP	GO:0006406	mRNA export from nucleus	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050657	nucleic acid transport	None	Extended
BP	GO:0050658	RNA transport	None	Extended
BP	GO:0051028	mRNA transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051236	establishment of RNA localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012476	GLE1	347	586

External Links

No external refs found!