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  5. AMTR_s00049p00185400

AMTR_s00049p00185400


Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.TNO1 tethering factor


Gene families : OG0003935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00185400
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT1G24460 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
AT4G31570 No alias CONTAINS InterPro DOMAIN/s: Prefoldin... 0.04 OrthoFinder output from all 47 species
Adi_g014679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22595 No alias vesicle trafficking tethering factor *(TNO1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010295001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
GSVIVT01033178001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033179001 No alias COP1-interactive protein 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_40009 No alias TNO1 vesicle trafficking tethering factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g38480.1 LOC_Os02g38480 TNO1 vesicle trafficking tethering factor 0.05 OrthoFinder output from all 47 species
MA_10431592g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10432450g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14490g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_156987g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_167448g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_4333439g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g21920.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g24585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g014200.3.1 Solyc05g014200 TNO1 vesicle trafficking tethering factor 0.04 OrthoFinder output from all 47 species
Solyc08g006420.3.1 Solyc08g006420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000922 spindle pole IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!