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Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.71
Description : 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica
Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00076p00189570 | evm_27.TU.AmTr_v1... | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012372 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g015908 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20640 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g17436 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene26222.t1 | Aspi01Gene26222 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g25397 | OPCL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G025100.1 | OPCL1, Ceric.36G025100 | not classified & original description: pacid=50568001... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g07176 | OPCL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g10656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g28355 | OPCL1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g10363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016171001 | OPCL1 | 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp. japonica | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19726 | OPCL1 | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g67530.1 | LOC_Os01g67530 | 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g07586 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g38504 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g46968 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15274 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18147 | OPCL1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g65418 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g10259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29127 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo177466 | OPCL1 | 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Smo181279 | No alias | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Smo231716 | No alias | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g069050.2.1 | Solyc11g069050 | 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g094520.2.1 | OPCL1, Solyc12g094520 | OPC-8:CoA synthetase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21116 | OPCL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g07385 | OPCL1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12748 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26630 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004865_P001 | Zm00001e004865 | 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| BP | GO:0008152 | metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006813 | potassium ion transport | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016833 | oxo-acid-lyase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |