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  5. AMTR_s00049p00098090

AMTR_s00049p00098090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.69

No description available


Gene families : OG0002636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00049p00098090
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00205140 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Ore_g40231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010680 No alias not classified & original description: CDS=1-261 0.03 OrthoFinder output from all 47 species
Sam_g28409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g113810.1.1 Solyc03g113810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!