AMTR_s00049p00081480 (ARR11,...)

Aliases : ARR11, evm_27.TU.AmTr_v1.0_scaffold00049.51

Description : RNA biosynthesis.transcriptional activation.ARR-B transcription factor

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00049p00081480
Cluster	HCCA: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00251530	evm_27.TU.AmTr_v1...	Multi-process regulation.circadian clock.evening element...	0.03	OrthoFinder output from all 47 species
AT1G67710	ARR11	response regulator 11	0.09	OrthoFinder output from all 47 species
AT2G40970	MYBC1	Homeodomain-like superfamily protein	0.03	OrthoFinder output from all 47 species
Aob_g10170	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Aob_g15800	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05984	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13806	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g70563	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene00999.t1	RR2, ARR2,...	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10218.t1	ARR11, Aspi01Gene10218	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10219.t1	ARR11, Aspi01Gene10219	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene50562.t1	Aspi01Gene50562	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Azfi_s0064.g035584	RR12, ARR12	subgroup ARR-B transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.06G008700.1	RR12, ARR12,...	subgroup ARR-B transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g05377	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g11168	No alias	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Ehy_g20630	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26693	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01007549001	ARR11	RNA biosynthesis.transcriptional activation.ARR-B...	0.04	OrthoFinder output from all 47 species
GSVIVT01010626001	ARR10, RR10	RNA biosynthesis.transcriptional activation.ARR-B...	0.02	OrthoFinder output from all 47 species
Gb_15501	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species
LOC_Os06g08440.1	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species
MA_210494g0010	RR12, ARR12	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species
MA_83273g0010	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species
Msp_g25181	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20928	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g065540.3.1	ARR1, RR1, Solyc01g065540	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Solyc12g099380.3.1	ARR1, RR1, Solyc12g099380	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
Spa_g02524	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g47334	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Tin_g01214	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g05141	MYBC1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g14624	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Zm00001e013844_P002	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species
Zm00001e018927_P001	ARR11, Zm00001e018927	B-type cytokinin ARR response activator. transcription...	0.06	OrthoFinder output from all 47 species
Zm00001e028539_P002	ARR11, Zm00001e028539	B-type cytokinin ARR response activator. transcription...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009582	detection of abiotic stimulus	IEP	HCCA
BP	GO:0009583	detection of light stimulus	IEP	HCCA
BP	GO:0009584	detection of visible light	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0018298	obsolete protein-chromophore linkage	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0051606	detection of stimulus	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	16	124
IPR001005	SANT/Myb	196	246

External Links

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AMTR_s00049p00081480 (ARR11,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation