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  5. AMTR_s00049p00076930

AMTR_s00049p00076930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00049.49

Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component


Gene families : OG0004513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004513_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00049p00076930

Target Alias Description ECC score Gene Family Method Actions
Ceric.15G063400.1 Ceric.15G063400 regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dcu_g08722 No alias regulatory component *(RPN7) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Dde_g04762 No alias regulatory component *(RPN7) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
MA_10428103g0010 No alias regulatory component RPN7 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Smo146093 No alias Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Zm00001e015028_P002 Zm00001e015028 regulatory component RPN7 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 254 354
IPR019585 Rpn7/CSN1 63 236
No external refs found!