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  5. AMTR_s00048p00210040

AMTR_s00048p00210040 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.187

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00210040
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 OrthoFinder output from all 47 species
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 OrthoFinder output from all 47 species
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.03 OrthoFinder output from all 47 species
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 OrthoFinder output from all 47 species
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 OrthoFinder output from all 47 species
Adi_g008979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26963 AtMYB40, MYB40 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40583 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07218 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11648.t1 AtMYB17, MYB17,... MYB class-R2R3 subgroup-2 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15104.t1 MYB103,... transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16340.t1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33140.t1 ATMYB61, MYB61,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67189.t1 ATMIXTA, MYB16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G018100.1 MYB103,... not classified & original description: pacid=50594460... 0.02 OrthoFinder output from all 47 species
Dac_g34252 ATMYB94, ATMYBCP70, MYB94 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13033 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019410001 MYB103, AtMYB103 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01026868001 AtMYB17, MYB17 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01035332001 MYB84, RAX3, ATMYB84 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_23244 AtMYB107, MYB107 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g07450.1 MYB86, ATMYB86,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g51260.1 ATY53, ATMYB67,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g02370.1 MYB19, AtMYB19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51799.1 AtMYB93, MYB93,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g42950.1 AtMYB79, MYB79,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45060.1 AtMYB17, MYB17,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os05g46610.1 MYB86, ATMYB86,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Len_g03854 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45631 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58682 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
MA_173523g0010 AtMYB17, MYB17 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_82197g0010 MYB30, ATMYB30 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp2g22560.1 MYB86, ATMYB86 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp5g19050.1 MYB6, AtMYB6 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g19683 MYB76, AtMYB76 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24762 AtMYB50, MYB50 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25108 MYB103, AtMYB103 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012546 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018401 AtMYB107, MYB107 not classified & original description: CDS=146-2035 0.02 OrthoFinder output from all 47 species
Sam_g02474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009650.1.1 MYB19, AtMYB19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc02g067340.4.1 ATMYB94,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc12g099140.2.1 BOS1, AtMYB108,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Spa_g18326 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g29799 MYB121, ATMYB121 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012497_P001 ATMYB101,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e020044_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e031799_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e035652_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
No external refs found!