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  5. AMTR_s00048p00204000

AMTR_s00048p00204000 (RPA70C, ATRPA70C,...)


Aliases : RPA70C, ATRPA70C, evm_27.TU.AmTr_v1.0_scaffold00048.172

Description : Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00204000

Target Alias Description ECC score Gene Family Method Actions
Gb_14632 ATRPA70A, RPA1A,... component RPA1 of single-stranded-DNA binding RPA... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR013955 Rep_factor-A_C 440 591
IPR004365 NA-bd_OB_tRNA 169 251
IPR001878 Znf_CCHC 724 739
IPR001878 Znf_CCHC 756 771
No external refs found!