AMTR_s00048p00184670 (CYCA2;4,...)


Aliases : CYCA2;4, evm_27.TU.AmTr_v1.0_scaffold00048.138

Description : Cell cycle.regulation.cyclins.CYCA-type cyclin


Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00184670

Target Alias Description ECC score Gene Family Method Actions
AT1G15570 CYCA2;3 CYCLIN A2;3 0.03 OrthoFinder output from all 47 species
AT1G44110 CYCA1;1 Cyclin A1;1 0.03 OrthoFinder output from all 47 species
Adi_g039314 CYCA2;1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16144 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Ala_g21059 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Ala_g25625 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Als_g14283 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Aop_g01772 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Aop_g19060 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18499.t1 CYCA1;1, Aspi01Gene18499 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008079 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010440 CYCA1;1 not classified & original description: CDS=585-2150 0.02 OrthoFinder output from all 47 species
Cba_g21394 CYCA1;1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G046900.1 CYCA1;1, Ceric.08G046900 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Ceric.26G030100.1 CYCA1;1, Ceric.26G030100 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Ceric.30G011000.1 CYCA1;1, Ceric.30G011000 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Ceric.33G050700.1 CYCA1;1, Ceric.33G050700 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Dac_g04219 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Dac_g11514 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Dac_g13212 CYCA1;1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04793 CYC3B, CYCA2;2, CYC2BAT regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Dcu_g12296 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Dcu_g31687 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01008823001 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 OrthoFinder output from all 47 species
Gb_03779 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Gb_10619 CYCA1;1 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
LOC_Os03g41100.1 CYCA3;1, LOC_Os03g41100 cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
LOC_Os12g31810.1 CYCA2;4, LOC_Os12g31810 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species
Len_g04784 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Len_g08312 CYC3B, CYCA2;2, CYC2BAT regulatory protein *(CYCA) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Len_g21318 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Lfl_g27348 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Lfl_g27435 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
MA_28323g0010 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
MA_88982g0010 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Msp_g10135 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Msp_g12560 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Nbi_g06697 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Nbi_g24493 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Ppi_g07555 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Ppi_g31211 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Sam_g12488 No alias regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Sam_g12489 No alias regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Sam_g28585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo442428 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 OrthoFinder output from all 47 species
Smo97411 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.03 OrthoFinder output from all 47 species
Solyc04g078310.3.1 CYCA3;1, Solyc04g078310 cyclin (CYCA) 0.06 OrthoFinder output from all 47 species
Solyc11g005090.2.1 CYCA1;1, Solyc11g005090 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Spa_g11241 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Spa_g30899 CYCA1;1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03369 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Tin_g30126 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Zm00001e005138_P001 CYCA3;1, Zm00001e005138 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Zm00001e026125_P002 CYCA1;1, Zm00001e026125 cyclin (CYCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 419 534
IPR006671 Cyclin_N 290 417
No external refs found!