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Aliases : evm_27.TU.AmTr_v1.0_scaffold00048.117
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00048p00164020 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00165910 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008787 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g010273 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g094710 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g107271 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0043.g027095 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G056300.1 | Ceric.30G056300 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G073100.1 | Ceric.32G073100 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g36010 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38085 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48203 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11588 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01002819001 | RMA3, ATRMA3 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g56070.3 | LOC_Os01g56070 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g61420.1 | LOC_Os01g61420 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g44820.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09801 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04855 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40712 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_132683g0020 | No alias | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13801 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00348 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g35625 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g41698 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62388 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012732 | RMA3, ATRMA3 | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-450 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017142 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24563 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g45037 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g089870.3.1 | Solyc02g089870 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03199 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08788 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002512_P002 | Zm00001e002512 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003329_P001 | Zm00001e003329 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005157_P001 | Zm00001e005157 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027279_P001 | Zm00001e027279 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006470 | protein dephosphorylation | IEP | HCCA |
| BP | GO:0007264 | small GTPase mediated signal transduction | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |