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  5. AMTR_s00048p00162020

AMTR_s00048p00162020 (TBR,...)


Aliases : TBR, evm_27.TU.AmTr_v1.0_scaffold00048.115

Description : Protein trichome birefringence OS=Arabidopsis thaliana


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00048p00162020

Target Alias Description ECC score Gene Family Method Actions
Ala_g11670 TBL21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05022 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17914.t1 TBL5, Aspi01Gene17914 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G055800.1 TBL25, Ceric.06G055800 mannan O-acetyltransferase *(MOAT) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01014107001 TBL41 Protein trichome birefringence-like 41 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os09g23360.1 TBL14, LOC_Os09g23360 Protein trichome birefringence-like 14 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_9190158g0010 TBL36 xylan O-acetyltransferase (XOAT) 0.04 OrthoFinder output from all 47 species
Mp2g11180.1 TBL11 rhamnogalacturonan-I O-acetyltransferase (TBL) 0.03 OrthoFinder output from all 47 species
Ore_g37248 TBL13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c5_14230V3.1 TBL12, Pp3c5_14230 Plant protein of unknown function (DUF828) 0.01 OrthoFinder output from all 47 species
Solyc07g062210.4.1 TBL37, Solyc07g062210 Protein trichome birefringence-like 37 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025846 TBL_N 178 231
IPR026057 PC-Esterase 233 518
No external refs found!